PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_019274-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 341aa    MW: 38575.7 Da    PI: 4.5142
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_019274-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.4e-11175218654
                    HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
            HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  NNU_019274-RA 175 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 218
                    589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.453169218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-15172233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.7E-12175224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-9175218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.66E-5176223No hitNo description
Gene3DG3DSA:4.10.280.106.0E-15176231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048731.14E-4267308No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MEVNEHGFLE ELLAFRRETW ETFPATGGMS ELFTNGWSFD CFDENPGLVV GPNSSFGGLA  60
AAVSTSAVPG FNGPFNETYC PYADGLWVPE MEDSSSYKKQ HDTPSFPSQE DYPSSLMEDE  120
EHGLLGDELR NLEERPTTCK MEPVQAPEIP VFNMGMCLER KNRSKKVEGQ PSKNLMAERR  180
RRKRLNDRLS MLRSVVPKIS KMDRTSILGD TIDYMKELLE RIKNLQDEID VDSDQLNLMS  240
IFKELKPNEI LVRNSPKFDV ERRNMDTRIE ICCAGKPGLL LSTVTTLEAL GLEIQQCVIS  300
CFNDFAMQAS CSEEMEQRTV ISSEDIKQAL FRNAGYGGRC L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177184ERRRRKRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275502.10.0PREDICTED: transcription factor bHLH93-like
SwissprotQ9LSL11e-84BH093_ARATH; Transcription factor bHLH93
TrEMBLF6GZL01e-162F6GZL0_VITVI; Putative uncharacterized protein
STRINGVIT_18s0001g08040.t011e-161(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-85beta HLH protein 93